{"id":13419,"date":"2011-05-27T09:40:13","date_gmt":"2011-05-27T09:40:13","guid":{"rendered":"https:\/\/wordpress.org\/plugins-wp\/knowledgeblog-arrayexpress\/"},"modified":"2011-05-27T10:26:34","modified_gmt":"2011-05-27T10:26:34","slug":"knowledgeblog-arrayexpress","status":"publish","type":"plugin","link":"https:\/\/co.wordpress.org\/plugins\/knowledgeblog-arrayexpress\/","author":7270180,"comment_status":"closed","ping_status":"closed","template":"","meta":{"version":"0.1","stable_tag":"0.1","tested":"3.1.4","requires":"3.0","requires_php":"","requires_plugins":"","header_name":"Knowledgeblog ArrayExpress","header_author":"Daniel Swan","header_description":"","assets_banners_color":"","last_updated":"2011-05-27 10:26:34","external_support_url":"","external_repository_url":"","donate_link":"","header_plugin_uri":"http:\/\/knowledgeblog.org\/knowledgeblog-arrayexpress","header_author_uri":"http:\/\/knowledgeblog.org","rating":0,"author_block_rating":0,"active_installs":0,"downloads":1151,"num_ratings":0,"support_threads":0,"support_threads_resolved":0,"author_block_count":0,"sections":["description","installation"],"tags":[],"upgrade_notice":[],"ratings":{"1":0,"2":0,"3":0,"4":0,"5":0},"assets_icons":[],"assets_banners":[],"assets_blueprints":{},"all_blocks":[],"tagged_versions":["0.1"],"block_files":[],"assets_screenshots":[],"screenshots":[]},"plugin_section":[],"plugin_tags":[39343,2994,39344,6618,39345],"plugin_category":[],"plugin_contributors":[81724,81723,81721,81722],"plugin_business_model":[],"class_list":["post-13419","plugin","type-plugin","status-publish","hentry","plugin_tags-arrayepress","plugin_tags-metadata","plugin_tags-microarray","plugin_tags-res-comms","plugin_tags-transcriptomics","plugin_contributors-d_swan","plugin_contributors-knowledgeblog","plugin_contributors-philliplord","plugin_contributors-sjcockell","plugin_committers-knowledgeblog"],"banners":[],"icons":{"svg":false,"icon":"https:\/\/s.w.org\/plugins\/geopattern-icon\/knowledgeblog-arrayexpress.svg","icon_2x":false,"generated":true},"screenshots":[],"raw_content":"<!--section=description-->\n<p>Interprets the &#091;aexp&#093; shortcode to extract and display metadata from the <a href=\"http:\/\/www.ebi.ac.uk\/arrayexpress\/\">ArrayExpress<\/a> XML API.\nThe correct shortcode format is &#091;aexp = \"id\"&#093;metadata&#091;\/aexp&#093;\nWhere id is the accession number of the ArrayExpress holding you wish to interrogate and metadata is one of the following types<\/p>\n\n<p>species         : returns species\naccession       : returns linked accession\nsubmissiondate      : returns submission date\nlastupdate      : returns last update date\nreleasedate     : returns release date\nname            : returns short experiment description\ndescription     : returns long experiment description\nscore           : returns MIAME scores (out of 5)\ncontact         : returns contact email address and role if supplied\ncitation        : returns citation, publication information and link to PubMed if supplied\ndatafiles       : returns links to raw and processed data files, sdrf and idf files\npng         : returns and links the experimental design png\nsvg         : returns and links the experimental design svg\nassays          : returns the number of assays\nsamples         : returns the number of samples \narraydesign     : returns and links to the array platform\nexperimenttypes     : returns the experiment types (time course data, aCGH, dye swapped etc.)\nexperimentalfactors : returns the experiment factors (drug dose, timepoints, genotypes, compounds etc.)\nsampleattributes    : returns the sample attributes (organism part, developmental stage, tissue source, sex, strain etc.)<\/p>\n\n<h3>Copyright<\/h3>\n\n<p>This plugin is copyright Daniel Swan, Newcastle University and is licensed under GPLv2.<\/p>\n\n<!--section=installation-->\n<ol>\n<li>Unzip the downloaded .zip archive to the <code>\/wp-content\/plugins\/<\/code> directory<\/li>\n<li>Activate the plugin through the 'Plugins' menu in WordPress<\/li>\n<li>Use the [aexp][\/aexp] shortcode somewhere on your site, to automatically insert ArrayExpress metadata<\/li>\n<\/ol>","raw_excerpt":"This plugin extracts metadata from ArrayExpress submission metadata using the [aexp] shortcode.","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin\/13419","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin"}],"about":[{"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/types\/plugin"}],"replies":[{"embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/comments?post=13419"}],"author":[{"embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wporg\/v1\/users\/knowledgeblog"}],"wp:attachment":[{"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/media?parent=13419"}],"wp:term":[{"taxonomy":"plugin_section","embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin_section?post=13419"},{"taxonomy":"plugin_tags","embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin_tags?post=13419"},{"taxonomy":"plugin_category","embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin_category?post=13419"},{"taxonomy":"plugin_contributors","embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin_contributors?post=13419"},{"taxonomy":"plugin_business_model","embeddable":true,"href":"https:\/\/co.wordpress.org\/plugins\/wp-json\/wp\/v2\/plugin_business_model?post=13419"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}